ABOUT THIS RECORD

ID: MNEST005779
species: Rattus norvegicus
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TGGGCGGCGCGGCGTGATCAATGCACAGCTACAGCTGGTTGAAGGGGACCAAATCCATCCAACAGCTGATTTGGTTCCATTTTACCAGCTTCAGCAAAGC
ATTTGGCTTCTGATCCACTGG

dot-bracket secondary structure
((((.(((...((((.....))))...)))..(((((((.(((.(((((((((((............))))))))))).))).)))))))((((..((((
.....))))))))))))....


SIMILARITIES

miRBase mmu-mir-133a-2: 3e-51 PMRD no hits microPC no hits

UniProt no hits RFAM mir-133: 1e-28

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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