ABOUT THIS RECORD

ID: MNEST005787
species: Rattus norvegicus
miRNA family: mir-199
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TGGAGATCCTGCTCCGTCGCCCCAGTGTTCAGACTACCTGTTCAGGACAATGCCGTTGTACAGTAGTCTGCACATTGGTTAGACTGGGCAAGGGCCAG

dot-bracket secondary structure
(((...((.(((((.(((...(((((((.((((((((.(((.(.((......))...).))))))))))).)))))))...))).))))).)).))).


SIMILARITIES

miRBase rno-mir-199a: 8e-51 PMRD no hits microPC no hits

UniProt no hits RFAM mir-199: 3e-44

most similar mature miRNAs

Identical with: rno-mir-199a from miRBase (MNEST032787)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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