ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf45
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGTTGGGGAAGCTTCTGGAC miRNA* CCAAAGCGGGTCGACGGAT mismatches: 4 bulges: 2 |
pre-miRNA
CCAGTCTATGCTCCGGTTGTGTTGTTGGGGAAGCTTCTGGACGGGATTTAGACCAGGAAACGGAAACCCGTGCGAAATCGAGCATCCTGGTTGTGCCTCG
ACCAAAGCGGGTCGACGGATAGTGCCGGTAAGTACGGA
dot-bracket secondary structure
....(((.(((((((((....(((((((....((((.(((.((((.....((((((((.((((....))))((........)).))))))))....))))
.)))))))...))))))).....)))))..)))).)))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
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CCAGTCTATGCTCCGGTTGTGTTGTTGGGGAAGCTTCTGGACGGGATTTAGACCAGGAAACGGAAACCCGTGCGAAATCGAGCATCCTGGTTGTGCCTCG
ACCAAAGCGGGTCGACGGATAGTGCCGGTAAGTACGGA
dot-bracket secondary structure
....(((.(((((((((....(((((((....((((.(((.((((.....((((((((.((((....))))((........)).))))))))....))))
.)))))))...))))))).....)))))..)))).)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
