ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2032
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTAGATACTCCCTAAGGCTT miRNA* GCCTTAGTGAATATCTACACT mismatches: 2 bulges: 0 |
pre-miRNA
CAAAAGACGAGATGTGCACACAAAGCTTTAAGCACTAATTAAGCCTTAGTGAATATCTACACTAGTAAGTTTTTCTTCATGTTTGAAATGCTTAGCATTG
TAGATACTCCCTAAGGCTTGGGTGGTATTGCGTTGTGTGGCCACTCGATCAACTTTGG
dot-bracket secondary structure
.....((((((.((.((((((((.((..((..((((...((((((((((.((.((((((((....(((((.((((.........)))).)))))....))
)))))).)).)))))))))))))).))..)).)))))).)))))))).))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAAAAGACGAGATGTGCACACAAAGCTTTAAGCACTAATTAAGCCTTAGTGAATATCTACACTAGTAAGTTTTTCTTCATGTTTGAAATGCTTAGCATTG
TAGATACTCCCTAAGGCTTGGGTGGTATTGCGTTGTGTGGCCACTCGATCAACTTTGG
dot-bracket secondary structure
.....((((((.((.((((((((.((..((..((((...((((((((((.((.((((((((....(((((.((((.........)))).)))))....))
)))))).)).)))))))))))))).))..)).)))))).)))))))).))........
SIMILARITIES| miRBase bdi-MIR5200: 0.0001 PMRD tae-miR2032: 1e-47 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: tae-miR2032 from PMRD (MNEST054751) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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