ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTACAAAGTTGAGTCATC miRNA* TGATTTAATTTTGTACTACA mismatches: 0 bulges: 0 |
pre-miRNA
ATGGTAAGAACTATCTCTCCGTTCTAAAATAGATGATTTAATTTTGTACTACAGTTAGTACAAAGTTGAGTCATCTATTTTAGAACGGAGGGAGTATTAT
CTATC
dot-bracket secondary structure
..(((((......((((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))))))))...))))
)....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
ATGGTAAGAACTATCTCTCCGTTCTAAAATAGATGATTTAATTTTGTACTACAGTTAGTACAAAGTTGAGTCATCTATTTTAGAACGGAGGGAGTATTAT
CTATC
dot-bracket secondary structure
..(((((......((((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))))))))...))))
)....
SIMILARITIES| miRBase tae-MIR1137: 1e-18 PMRD ata-miR1120: 6e-21 microPC miR1439: 1e-18 | UniProt no hits RFAM MIR1122: 3e-23 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
