ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTACAAAGTTGAGTCATC miRNA* TGACCCAATTTTATACTAAT mismatches: 2 bulges: 0 |
pre-miRNA
TTTTCCTGTATACTCCCTCTGTTCCAAAATAGATGACCCAATTTTATACTAATTTTTTACTAAAGTTAGTACAAAGTTGAGTCATCTATTTCGGAACGGA
GGGAGTATAAATTACA
dot-bracket secondary structure
........(((((((((((((((((.(((((((((((.(((((((.((((((((((.....)))))))))).))))))).))))))))))).))))))))
))))))))).......
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
TTTTCCTGTATACTCCCTCTGTTCCAAAATAGATGACCCAATTTTATACTAATTTTTTACTAAAGTTAGTACAAAGTTGAGTCATCTATTTCGGAACGGA
GGGAGTATAAATTACA
dot-bracket secondary structure
........(((((((((((((((((.(((((((((((.(((((((.((((((((((.....)))))))))).))))))).))))))))))).))))))))
))))))))).......
SIMILARITIES| miRBase tae-MIR1137: 3e-17 PMRD ata-miR1120: 7e-24 microPC miR1137: 5e-25 | UniProt no hits RFAM MIR1122: 9e-30 | most similar mature miRNAs |
Identical with: miR1137 from microPC (MNEST045542) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
