ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAATACAAAGTTGAGTCATCT miRNA* ATGACGCAACTTTATACTAGC mismatches: 3 bulges: 0 |
pre-miRNA
CCTTCCATGCTACTCCCTCCGGTCCAAAATAGATGACGCAACTTTATACTAGCTCTAGGACAAAGTTAATACAAAGTTGAGTCATCTATTTTGGAACGGA
GGGAGTGGTAGTTATA
dot-bracket secondary structure
.......((((((((((((((.(((((((((((((((.(((((((.((.(((((.........))))).)).))))))).))))))))))))))).))))
))))))))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCTTCCATGCTACTCCCTCCGGTCCAAAATAGATGACGCAACTTTATACTAGCTCTAGGACAAAGTTAATACAAAGTTGAGTCATCTATTTTGGAACGGA
GGGAGTGGTAGTTATA
dot-bracket secondary structure
.......((((((((((((((.(((((((((((((((.(((((((.((.(((((.........))))).)).))))))).))))))))))))))).))))
))))))))))......
SIMILARITIES| miRBase tae-MIR1137: 0.000000000000002 PMRD ata-miR1120: 2e-21 microPC miR1439: 0.00000000000003 | UniProt no hits RFAM MIR1122: 2e-27 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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