ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAATACAAAGTTGAGTCATCT miRNA* ATGACGCAACTTTATACTAAC mismatches: 3 bulges: 0 |
pre-miRNA
CCTTCCATGCTACTCCCTCCGTTCCANAATAGATGACGCAACTTTATACTAACTTTAGTACAAAGTTAATACAAAGTTGAGTCATCTATTTTGGAACGGA
GGGAGTGGTAGTTATA
dot-bracket secondary structure
.......(((((((((((((((((((.((((((((((.(((((((.((.(((((((.....))))))).)).))))))).)))))))))).)))))))))
))))))))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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CCTTCCATGCTACTCCCTCCGTTCCANAATAGATGACGCAACTTTATACTAACTTTAGTACAAAGTTAATACAAAGTTGAGTCATCTATTTTGGAACGGA
GGGAGTGGTAGTTATA
dot-bracket secondary structure
.......(((((((((((((((((((.((((((((((.(((((((.((.(((((((.....))))))).)).))))))).)))))))))).)))))))))
))))))))))......
SIMILARITIES| miRBase tae-MIR1137: 2e-18 PMRD ata-miR1120: 7e-27 microPC miR1439: 7e-18 | UniProt no hits RFAM MIR1122: 9e-33 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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