ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTATAAAGTTGAGTCATGT miRNA* ATGACCCAACTTTATACTACG mismatches: 2 bulges: 0 |
pre-miRNA
TCCAAAATAGATGACCCAACTTTATACTACGAAGTTGAGTCATGTATTTTAGAATGGATGAGGTATGCCAATATTTGTCTTATTTACTACTCCCTCCGTT
CTAAAATACATGACTCAACTTCGTAGTATAAAGTTGAGTCATGTATTTTAG
dot-bracket secondary structure
...((((((.(((((.((((((((((((((((((((((((((((((((((((((((((.((((((.....((....))......))))..))..))))))
)))))))))))))))))))))))))))))))))))).))))).))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCCAAAATAGATGACCCAACTTTATACTACGAAGTTGAGTCATGTATTTTAGAATGGATGAGGTATGCCAATATTTGTCTTATTTACTACTCCCTCCGTT
CTAAAATACATGACTCAACTTCGTAGTATAAAGTTGAGTCATGTATTTTAG
dot-bracket secondary structure
...((((((.(((((.((((((((((((((((((((((((((((((((((((((((((.((((((.....((....))......))))..))..))))))
)))))))))))))))))))))))))))))))))))).))))).))))))..
SIMILARITIES| miRBase tae-MIR1137: 0.0000005 PMRD hpr-miR1120: 0.000000008 microPC miR1439: 0.0000005 | UniProt no hits RFAM MIR1122: 0.0000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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