ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1136
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGTCGCAGGTATGGATGTATCTA miRNA* GATACATCCATTTCTGCGGGGAGT mismatches: 2 bulges: 0 |
pre-miRNA
CTTGTCAATTACTCCCTCCGTTCCGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCTGCGGGGAGTAATT
TGGAACANAGGGAGTACATGGCAT
dot-bracket secondary structure
..(((((..((((((((..((((((((((((((.(((((((.(((((((((((((((...((....))))))))))))))))).))))))).))))))))
))))))..))))))))..))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CTTGTCAATTACTCCCTCCGTTCCGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCTGCGGGGAGTAATT
TGGAACANAGGGAGTACATGGCAT
dot-bracket secondary structure
..(((((..((((((((..((((((((((((((.(((((((.(((((((((((((((...((....))))))))))))))))).))))))).))))))))
))))))..))))))))..))))).
SIMILARITIES| miRBase tae-MIR1136: 2e-42 PMRD tae-miR1136: 2e-42 microPC miR1439: 4e-35 | UniProt no hits RFAM MIR1122: 2e-37 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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