ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAATACTCCCTCCGTCCGGA miRNA* CGGACGGAGGGAGTAGAAGCT mismatches: 4 bulges: 0 |
pre-miRNA
CTCGCAAATAATAAATACTCCCTCCGTCCGGAAAAGCTTGTCCCAAGCTTGTTCCAGTTGGTGCTAGATACATCCATTTGAGGGACAAGTTTTTTCGGAC
GGAGGGAGTAGAAGCTCCTTATTA
dot-bracket secondary structure
...............(((((((((((((((((((((((((((((.(((.....((....)).)))((((......))))..)))))))))))))))))))
))))))))))..............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCGCAAATAATAAATACTCCCTCCGTCCGGAAAAGCTTGTCCCAAGCTTGTTCCAGTTGGTGCTAGATACATCCATTTGAGGGACAAGTTTTTTCGGAC
GGAGGGAGTAGAAGCTCCTTATTA
dot-bracket secondary structure
...............(((((((((((((((((((((((((((((.(((.....((....)).)))((((......))))..)))))))))))))))))))
))))))))))..............
SIMILARITIES| miRBase tae-MIR1133: 0.000000000007 PMRD tae-miR1133: 0.000000000007 microPC miR1128: 0.000002 | UniProt no hits RFAM MIR1122: 8e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
