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ABOUT THIS RECORD
ID:
MNEST005826
species:
Triticum aestivum
miRNA family:
MIR1132
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATTATGGAACGGAGGGAGTA
miRNA*
CTCCCTCCGTTCCTGATTCT
mismatches:
1
bulges:
1
View larger
pre-miRNA
AAACAGCACAAGATGTTGTCGA
CTCCCTCCGTTCCTGATTCT
TGTTGTTGTTTGGACTAAAACCACCATGACAAG
AATTATGGAACGGAGGGAGTA
GCTA
GTTATGTATGTTGGC
dot-bracket secondary structure
..((((((.....))))))..(
((((((((((((((((((((
((((((.((((......)))).))...))))))
))))).)))))))))))))).
((((
(.........)))))
SIMILARITIES
miRBase
no hits
PMRD
hpi-miR1122
:
0.00009
microPC
miR1132
:
0.00002
UniProt
no hits
RFAM
MIR1122: 0.00000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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