ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1132
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATTATGGAACGGAGGGAGTA miRNA* CCCCCTCCGTTTATAATTCT mismatches: 1 bulges: 1 |
pre-miRNA
CATAACCAACTACCCCCTCCGTTTATAATTCTTGTCATGGTTTTAGTTCAAACGACAAGAATTATGGAACGGAGGGAGTACTTGCTATG
dot-bracket secondary structure
((((..(((.(((.((((((((((((((((((((((...((((......)))))))))))))))).)))))))))).))).))).))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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CATAACCAACTACCCCCTCCGTTTATAATTCTTGTCATGGTTTTAGTTCAAACGACAAGAATTATGGAACGGAGGGAGTACTTGCTATG
dot-bracket secondary structure
((((..(((.(((.((((((((((((((((((((((...((((......)))))))))))))))).)))))))))).))).))).))))
SIMILARITIES| miRBase bdi-MIR5175b: 0.00002 PMRD no hits microPC miR1132: 0.00007 | UniProt no hits RFAM MIR1122: 0.000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
