ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1132
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTATGGAACGGAGGGAGTA miRNA* CCTACTTTTTTCTATAAATATG mismatches: 4 bulges: 1 |
pre-miRNA
ATTCTAGATGTACCTACTTTTTTCTATAAATATGGTCAAAGTTTGTAATGTTTGACTTTTGCAAAAATCTATAGACACTATATTATGGAACGGAGGGAGT
ACTAGCTGCA
dot-bracket secondary structure
....(((..((((...((((.((((((((.((((((....(((((((((.((((.......)))).)).))))))))))))))))))))).))))...))
))...)))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTCTAGATGTACCTACTTTTTTCTATAAATATGGTCAAAGTTTGTAATGTTTGACTTTTGCAAAAATCTATAGACACTATATTATGGAACGGAGGGAGT
ACTAGCTGCA
dot-bracket secondary structure
....(((..((((...((((.((((((((.((((((....(((((((((.((((.......)))).)).))))))))))))))))))))).))))...))
))...)))..
SIMILARITIES| miRBase osa-MIR818d: 0.000005 PMRD osa-miR818d: 0.000005 microPC miR1436: 2e-45 | UniProt no hits RFAM MIR806: 0.00002 | most similar mature miRNAs |
Identical with: miR1436 from microPC (MNEST046825) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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