ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2001
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCTCGCCGGAGCANCGTGCA miRNA* CGCGCTGCTCCGTCNAGCGTG mismatches: 3 bulges: 2 |
pre-miRNA
TCCATGGCGATTCGGCGGCTCCGCTCGCCGGAGCANCGTGCAACGGAGGGATCCCGCGCGCTGCTCCGTCNAGCGTGGCCACCCGTGCAGCTACA
dot-bracket secondary structure
....((((....(((.((((.((((.((.((((((.(((((...(((....))).))))).))))))))..)))).))))..)))....))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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TCCATGGCGATTCGGCGGCTCCGCTCGCCGGAGCANCGTGCAACGGAGGGATCCCGCGCGCTGCTCCGTCNAGCGTGGCCACCCGTGCAGCTACA
dot-bracket secondary structure
....((((....(((.((((.((((.((.((((((.(((((...(((....))).))))).))))))))..)))).))))..)))....))))..
SIMILARITIES| miRBase no hits PMRD tae-miR2001: 9e-26 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
