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ABOUT THIS RECORD
ID:
MNEST005838
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCCGTTCCTAAATATAAGTC
miRNA*
CTTATATTTAAGAACGGAGGG
mismatches:
1
bulges:
0
View larger
pre-miRNA
CCTTGTACTCC
CTCCGTTCCTAAATATAAGTC
TTTGTAGAGATTCCACTATGAATCACGTACGGATGTATATAGATGCATTTTAGAGTGTAGATTCACTC
ATTTTGCTCCGTATGTGGTCCATAAGTAAAATCTGTCCAAAAGA
CTTATATTTAAGAACGGAGGG
AAGTACAT
dot-bracket secondary structure
...((((((((
((((((((.((((((((((((
(((....(((((..((((((.((((((((((((...........(((.....(((((......)))))
....))))))))))))))).))).)))..))))).....)))))
)))))))))).))))))))))
.)))))).
SIMILARITIES
miRBase
tae-MIR1126
:
3e-39
PMRD
tae-miR1126
:
3e-39
microPC
miR1436
:
1e-20
UniProt
no hits
RFAM
MIR1122: 7e-53
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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