ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTAAACTAATATAAGAA miRNA* CTTATATTAGTTTACAGAGGG mismatches: 2 bulges: 0 |
pre-miRNA
CTTTCTTTAGTCTGGTACTCCCTCCGTAAACTAATATAAGAATGTTTAGATCACTACTTTAGTAATCTAAACACTCTTATATTAGTTTACAGAGGGAGTA
CTAGCTAGTCTGTA
dot-bracket secondary structure
......((((.(((((((((((((.((((((((((((((((.(((((((((.((((...)))).))))))))).)))))))))))))))).)))))))))
))))))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTTCTTTAGTCTGGTACTCCCTCCGTAAACTAATATAAGAATGTTTAGATCACTACTTTAGTAATCTAAACACTCTTATATTAGTTTACAGAGGGAGTA
CTAGCTAGTCTGTA
dot-bracket secondary structure
......((((.(((((((((((((.((((((((((((((((.(((((((((.((((...)))).))))))))).)))))))))))))))).)))))))))
))))))))......
SIMILARITIES| miRBase tae-MIR1121: 1e-22 PMRD tae-miR1121: 1e-22 microPC miR1121: 0.000000006 | UniProt no hits RFAM MIR1122: 5e-28 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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