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ABOUT THIS RECORD
ID:
MNEST005865
species:
Triticum aestivum
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTGTAAACTAATATAAGAG
miRNA*
TTCATATTANTTTACAGAGGG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GACATATGTGATAAGTACTCC
CTCTGTAAACTAATATAAGAG
CGTTTAGATCACTAAAANGTGATCTAAACGCT
TTCATATTANTTTACAGAGGG
GGTAC
AGGTCAAGGGGCA
dot-bracket secondary structure
........((((..(((((((
(((((((((.((((((.((((
((((((((((((......))))))))))))))
)).)))))).)))))))))))
)))))
..)))).......
SIMILARITIES
miRBase
tae-MIR1121
:
0.0000000000004
PMRD
ave-miR1120
:
4e-16
microPC
miR1121
:
0.00002
UniProt
no hits
RFAM
MIR1122: 1e-19
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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