ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCTGCAAACTAATATAAGAC miRNA* TTTATATTAGTTTACAGAGGG mismatches: 1 bulges: 0 |
pre-miRNA
TGTACTCCATCTTCTGCAAACTAATATAAGACTTTTTAGATCACTATATGCTTTAGTGATCTAAAAAGTTTTATATTAGTTTACAGAGGGAGTATTAG
dot-bracket secondary structure
.(((((((...(((((.(((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))).))))))))))))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGTACTCCATCTTCTGCAAACTAATATAAGACTTTTTAGATCACTATATGCTTTAGTGATCTAAAAAGTTTTATATTAGTTTACAGAGGGAGTATTAG
dot-bracket secondary structure
.(((((((...(((((.(((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))).))))))))))))...
SIMILARITIES| miRBase no hits PMRD tmo-miR1120: 9e-20 microPC no hits | UniProt no hits RFAM MIR1122: 2e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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