ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTGTAAACTAATATAAAAG miRNA* TTTATATTACTTTACGGAGGG mismatches: 1 bulges: 0 |
pre-miRNA
TTGCCATAGCTANTTAACTAGTACGTATTCCCTCTGTAAACTAATATAAAAGCATTTNNATCATTAAAGTAGTGATCTAAACGTTTTTATATTACTTTAC
GGAGGGAGTATTGACAGGAGACAGCGTATAACAT
dot-bracket secondary structure
........(((..((..((.((..((((((((((((((((.((((((((((((.(((..(((((((...)))))))..))).)))))))))))).)))))
)))))))))))..)))).))..))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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TTGCCATAGCTANTTAACTAGTACGTATTCCCTCTGTAAACTAATATAAAAGCATTTNNATCATTAAAGTAGTGATCTAAACGTTTTTATATTACTTTAC
GGAGGGAGTATTGACAGGAGACAGCGTATAACAT
dot-bracket secondary structure
........(((..((..((.((..((((((((((((((((.((((((((((((.(((..(((((((...)))))))..))).)))))))))))).)))))
)))))))))))..)))).))..))).........
SIMILARITIES| miRBase tae-MIR1121: 0.00000000003 PMRD tmo-miR1120: 8e-18 microPC miR1121: 0.0004 | UniProt no hits RFAM MIR1122: 1e-19 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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