ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTGTAAACTAATATAAAAG miRNA* CTTATATTANTTTACAGAGGG mismatches: 2 bulges: 0 |
pre-miRNA
TACAGTAATACAAGCTACTCCCTCTGTAAACTAATATAAAAGTGTTTAGATTATTATTTTAGTGATCTAAACGCTCTTATATTANTTTACAGAGGGAGTA
TAATGTATCTGTAT
dot-bracket secondary structure
(((((..(((((...(((((((((((((((.((((((((.((((((((((((((((...)))))))))))))))).)))))))).)))))))))))))))
...)))))))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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TACAGTAATACAAGCTACTCCCTCTGTAAACTAATATAAAAGTGTTTAGATTATTATTTTAGTGATCTAAACGCTCTTATATTANTTTACAGAGGGAGTA
TAATGTATCTGTAT
dot-bracket secondary structure
(((((..(((((...(((((((((((((((.((((((((.((((((((((((((((...)))))))))))))))).)))))))).)))))))))))))))
...)))))))))).
SIMILARITIES| miRBase tae-MIR1121: 0.000000000002 PMRD tmo-miR1120: 6e-18 microPC miR1121: 0.000001 | UniProt no hits RFAM MIR1122: 5e-28 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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