ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTAAACTAATATAAGAG miRNA* CTTACATTAGTTTACAGAGGG mismatches: 2 bulges: 0 |
pre-miRNA
ATGGCCCTACAAAATTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAGTACTAAAGTAGTGATCTAAACGCTCTTACATTAGTTTACAGAGGGTGTA
CAAAATAATCATCA
dot-bracket secondary structure
.((......))....(((.(((((.((((((((((.((((((((((((((.(((((...))))).)))))))))))))).)))))))))).))))).)))
..............
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGGCCCTACAAAATTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAGTACTAAAGTAGTGATCTAAACGCTCTTACATTAGTTTACAGAGGGTGTA
CAAAATAATCATCA
dot-bracket secondary structure
.((......))....(((.(((((.((((((((((.((((((((((((((.(((((...))))).)))))))))))))).)))))))))).))))).)))
..............
SIMILARITIES| miRBase tae-MIR1121: 0.000000000002 PMRD tmo-miR1120: 1e-19 microPC miR1121: 0.000000001 | UniProt no hits RFAM MIR1122: 9e-33 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
