ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2015
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCATCATCTCGAACTCGTCG miRNA* ACGAGTTCCAGACGATGCAGG mismatches: 3 bulges: 0 |
pre-miRNA
TTGGCCTCCTTGTGGAAGCCCTGCATCATCTCGAACTCGTCGGTGCGATAGCGTGCAGCGTGACATGCTGTTCATCACCAACGAGTTCCAGACGATGCAG
GCCTTCATCAAGGTGGAGC
dot-bracket secondary structure
....((.(((((..((((.((((((((.(((.((((((((.((((.(((((((((((...)).)))))))))...)))).)))))))).))).)))))))
).))))..))))).))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGGCCTCCTTGTGGAAGCCCTGCATCATCTCGAACTCGTCGGTGCGATAGCGTGCAGCGTGACATGCTGTTCATCACCAACGAGTTCCAGACGATGCAG
GCCTTCATCAAGGTGGAGC
dot-bracket secondary structure
....((.(((((..((((.((((((((.(((.((((((((.((((.(((((((((((...)).)))))))))...)))).)))))))).))).)))))))
).))))..))))).))...
SIMILARITIES| miRBase no hits PMRD tae-miR2015: 4e-47 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: tae-miR2015 from PMRD (MNEST054731) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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