ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATACTCTCTCCGTCCCAAAAT miRNA* TTTGGGACNGNGANAGTANT mismatches: 5 bulges: 0 |
pre-miRNA
ATCTATGTCAAATACTCTCTCCGTCCCAAAATAANTGTCTCAACTTTAATATAACTTTATACTAAAGTTANTACNAANTANAGACAGTTATTTTGGGACN
GNGANAGTANT
dot-bracket secondary structure
............((((.((...((((((((((((.(((((.....((..((.(((((((...)))))))..))..))....))))).)))))))))))).
..)).))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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ATCTATGTCAAATACTCTCTCCGTCCCAAAATAANTGTCTCAACTTTAATATAACTTTATACTAAAGTTANTACNAANTANAGACAGTTATTTTGGGACN
GNGANAGTANT
dot-bracket secondary structure
............((((.((...((((((((((((.(((((.....((..((.(((((((...)))))))..))..))....))))).)))))))))))).
..)).))))..
SIMILARITIES| miRBase osa-MIR1862c: 0.00002 PMRD hpr-miR1120: 0.00000002 microPC miR1439: 0.000000006 | UniProt no hits RFAM MIR1122: 0.000000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
