ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTACTCCCTTCGTCCCATAAT miRNA* TACGGGACAGAGGGAGTAGTTAG mismatches: 2 bulges: 2 |
pre-miRNA
ATGCTACTTTTGTACTCCCTTCGTCCCATAATGTAAGATGTTTTTTGACACTACACTACAGTCAGAAAATGTCTTACATTACGGGACAGAGGGAGTAGTT
AGGAGATT
dot-bracket secondary structure
......(((((((((((((((.(((((.(((((((((((((((((((((...........))))))))))))))))))))).))))).)))))))))..)
)))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGCTACTTTTGTACTCCCTTCGTCCCATAATGTAAGATGTTTTTTGACACTACACTACAGTCAGAAAATGTCTTACATTACGGGACAGAGGGAGTAGTT
AGGAGATT
dot-bracket secondary structure
......(((((((((((((((.(((((.(((((((((((((((((((((...........))))))))))))))))))))).))))).)))))))))..)
)))))...
SIMILARITIES| miRBase tae-MIR1120: 0.00008 PMRD tae-miR1120: 0.00008 microPC miR1436: 8e-42 | UniProt no hits RFAM MIR1122: 1e-16 | most similar mature miRNAs |
Identical with: miR1436 from microPC (MNEST045479) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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