miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST005922
species: Triticum aestivum
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGATACATCCGTATCTAGA

miRNA*
 TAGATACGGAGGTATCTAGC

mismatches: 1
bulges: 0
View larger
pre-miRNA
 GTAGCATATTTCGTACTCCCTCCGTTCCAAATTACTTGTCTTAGATTTGTCTAGATACGGAGGTATCTAGCACTAAAATGAGTCTAGATACATCCGTATC
TAGACAAATCCAAGACAAGTAATTCGGAACGGAGGGAGTACGAANGANGCTN

dot-bracket secondary structure
.........(((((((((((((((((((.(((((((((((((.((((((((((((((((((.((((((((.(((......))))))))))).))))))))
)))))))))).))))))))))))).)))))))))))))))))))........


SIMILARITIES
miRBase tae-MIR1122: 1e-16

PMRD hpi-miR1122: 2e-18

microPC miR1122: 1e-22		UniProt no hits

RFAM MIR1122: 2e-59		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record




Liczniki na strone;