ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1122
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGATACATCCGTATCTAGA miRNA* TAGATACGGAGGTATCTAGN mismatches: 1 bulges: 0 |
pre-miRNA
TACTNCCTCCGGTTNAAATTACTTGCTCTTANATTTGTCTAGATACGGAGGTATCTAGNACNAAAAGTAAGTCTAGATACATCCGTATCTAGANAAATTC
AAGACAAGTAATTCGGAACAGAGGGAGTACGTA
dot-bracket secondary structure
((((.((((..(((..(((((((((.((((..((((.((((((((((((.((((((((.((.........)))))))))).)))))))))))).))))..
)))))))))))))...))).)))).))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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TACTNCCTCCGGTTNAAATTACTTGCTCTTANATTTGTCTAGATACGGAGGTATCTAGNACNAAAAGTAAGTCTAGATACATCCGTATCTAGANAAATTC
AAGACAAGTAATTCGGAACAGAGGGAGTACGTA
dot-bracket secondary structure
((((.((((..(((..(((((((((.((((..((((.((((((((((((.((((((((.((.........)))))))))).)))))))))))).))))..
)))))))))))))...))).)))).))))....
SIMILARITIES| miRBase tae-MIR1136: 0.000006 PMRD tae-miR1136: 0.000006 microPC miR1122: 0.000000000002 | UniProt no hits RFAM MIR1122: 1e-29 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
