miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST005927
species: Triticum aestivum
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGATACATCAGTATCTAGAC

miRNA*
 CTAGATACGGAGGTATCTAGC

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TGTGATATAGCTACGTACTTCCCCCGTTCCGAATTACTTGTCTTAGATTTGTCTAGATACGGAGGTATCTAGCACTAAAATGAGTCTAGATACATCAGTA
TCTAGACAAATTCAAGACAAGTAATTCGGAACGGAGGGAGTACATGACATAACGGA

dot-bracket secondary structure
.((......))...((((((((.(((((((((((((((((((((.(((((((((((((((.((.((((((((.(((......))))))))))).)).)))
)))))))))))).))))))))))))))))))))).)))))))).............


SIMILARITIES
miRBase tae-MIR1122: 0.000000008

PMRD tmo-miR1122: 6e-16

microPC miR1122: 6e-25		UniProt no hits

RFAM MIR1122: 3e-52		most similar mature miRNAs

Identical with: miR1122 from microPC (MNEST044976)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;