ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1127
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCCGTTCGGAATTACAT miRNA* GTAATTCGGAACGTAGGGAGT mismatches: 3 bulges: 0 |
pre-miRNA
AACCATTCTACTCCCTCCGTTCGGAATTACATGTCGTAGAAATGGATGTATTTAGATGTATTTTAATTCTAGATATATCCATTTCCGAGACAAGTAATTC
GGAACGTAGGGAGTATGTCTTT
dot-bracket secondary structure
........((((((((.(((((.(((((((.((((...((((((((((((((((((..((...))..))))))))))))))))))...)))).)))))))
.))))).)))))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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AACCATTCTACTCCCTCCGTTCGGAATTACATGTCGTAGAAATGGATGTATTTAGATGTATTTTAATTCTAGATATATCCATTTCCGAGACAAGTAATTC
GGAACGTAGGGAGTATGTCTTT
dot-bracket secondary structure
........((((((((.(((((.(((((((.((((...((((((((((((((((((..((...))..))))))))))))))))))...)))).)))))))
.))))).)))))))).......
SIMILARITIES| miRBase tae-MIR1135: 2e-30 PMRD tae-miR1135: 2e-30 microPC miR1128: 1e-34 | UniProt no hits RFAM MIR1122: 6e-31 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
