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ABOUT THIS RECORD
ID:
MNEST005940
species:
Triticum aestivum
miRNA family:
MIR1127
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCTCCGTTCGGAATTACTT
miRNA*
GTAATTCCGAACGGAGGGAGT
mismatches:
0
bulges:
0
View larger
pre-miRNA
TAAGAAGCTAC
TCCCTCCGTTCGGAATTACTT
GTCTCGGATATGGATGTATCTAGAACTAAAATATGTTTAGATACATCCATTTCTACGACAA
GTAATTC
CGAACGGAGGGAGT
ACGTACTA
dot-bracket secondary structure
......(((((
(((((((((((((((((((((
(((..(((.(((((((((((((((...........))))))))))))))).)))..)))))
)))))))
))))))))))))))
).))....
SIMILARITIES
miRBase
tae-MIR1135
:
1e-44
PMRD
tae-miR1135
:
1e-44
microPC
miR1128
:
6e-40
UniProt
no hits
RFAM
MIR1122: 3e-39
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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