ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1127
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCCGTTCGGAATTACTT miRNA* GNAATTCCGAACGGAGGGAGN mismatches: 1 bulges: 0 |
pre-miRNA
GTAGTACGTACTCCCTCCGTTCGGAATTACTTGTCGTANAAATGGATGTATCTAAACATATTTTAGNTCTAGATACATCCATATCCGANACAAGNAATTC
CGAACGGAGGGAGNANNTNCNN
dot-bracket secondary structure
..........((((((((((((((((((.(((((((.....(((((((((((((...............)))))))))))))...)))..)))).)))))
))))))))))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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GTAGTACGTACTCCCTCCGTTCGGAATTACTTGTCGTANAAATGGATGTATCTAAACATATTTTAGNTCTAGATACATCCATATCCGANACAAGNAATTC
CGAACGGAGGGAGNANNTNCNN
dot-bracket secondary structure
..........((((((((((((((((((.(((((((.....(((((((((((((...............)))))))))))))...)))..)))).)))))
))))))))))))).........
SIMILARITIES| miRBase tae-MIR1135: 9e-36 PMRD tae-miR1135: 9e-36 microPC miR1128: 5e-31 | UniProt no hits RFAM MIR1122: 2e-30 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
download this record
