ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1127
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCCGTTCGGAATTACTT miRNA* GTAATTCCGAACGGAGGGAGT mismatches: 0 bulges: 0 |
pre-miRNA
TCCATATACAGTAGTACGTACTCCCTCCGTTCGGAATTACTTGTCGTANAAATGGATGTATCTAAACATATTTTANTTCTANATACATCCATATCCGAGA
CAAGTAATTCCGAACGGAGGGAGTANGT
dot-bracket secondary structure
...............((.(((((((((((((((((((((((((((......((((((((((.((...............)).))))))))))......))
))))))))))))))))))))))))).))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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TCCATATACAGTAGTACGTACTCCCTCCGTTCGGAATTACTTGTCGTANAAATGGATGTATCTAAACATATTTTANTTCTANATACATCCATATCCGAGA
CAAGTAATTCCGAACGGAGGGAGTANGT
dot-bracket secondary structure
...............((.(((((((((((((((((((((((((((......((((((((((.((...............)).))))))))))......))
))))))))))))))))))))))))).))
SIMILARITIES| miRBase tae-MIR1135: 9e-39 PMRD tae-miR1135: 9e-39 microPC miR1128: 6e-34 | UniProt no hits RFAM MIR1122: 3e-33 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
download this record
