ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2009
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAGATGAGAAGGTAGATCAA miRNA* GCTTAATCTTCTAATCTTCTA mismatches: 5 bulges: 0 |
pre-miRNA
ATCCACCTTACATATCGAATGAGCTTGCTTAATCTTCTAATCTTCTAAAAACATGCTTAGACATAATAACTAATCCTATAGATGAGAAGGTAGATCAAAC
TACTGGTAAAAGAGGGTTGAC
dot-bracket secondary structure
.((.(((((...(((((....((.(((.((.(((((((.(((((((((........)))))..................)))).))))))).)).))).)
)..)))))....))))).)).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
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ATCCACCTTACATATCGAATGAGCTTGCTTAATCTTCTAATCTTCTAAAAACATGCTTAGACATAATAACTAATCCTATAGATGAGAAGGTAGATCAAAC
TACTGGTAAAAGAGGGTTGAC
dot-bracket secondary structure
.((.(((((...(((((....((.(((.((.(((((((.(((((((((........)))))..................)))).))))))).)).))).)
)..)))))....))))).)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
