ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1439
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGGAACGGAGGGAGTAAA miRNA* TACTCCCTTTGTTCCAAAATA mismatches: 2 bulges: 0 |
pre-miRNA
TAAATACATAAATACTCCCTTTGTTCCAAAATATTTGTCTTAAATTTCAACAAGGGACTATTTACAATCCAAAATATGTCTATATACATCCGTATGGGGG
AGCCCATTTGAAATCTTTAAAAAAACAAATTTTTTGGAACGGAGGGAGTAAATACCATCAG
dot-bracket secondary structure
............(((((((((((((((((((.((((((.(((((((((((...(((..(((((........)))))..(((.(((((....)))))..))
).)))..))))))..)))))....)))))).)))))))))))))))))))...........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAAATACATAAATACTCCCTTTGTTCCAAAATATTTGTCTTAAATTTCAACAAGGGACTATTTACAATCCAAAATATGTCTATATACATCCGTATGGGGG
AGCCCATTTGAAATCTTTAAAAAAACAAATTTTTTGGAACGGAGGGAGTAAATACCATCAG
dot-bracket secondary structure
............(((((((((((((((((((.((((((.(((((((((((...(((..(((((........)))))..(((.(((((....)))))..))
).)))..))))))..)))))....)))))).)))))))))))))))))))...........
SIMILARITIES| miRBase tae-MIR1122: 0.0000001 PMRD tae-miR1122: 0.0000001 microPC miR1436: 0.00003 | UniProt no hits RFAM MIR1122: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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