ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1439
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGGAACGGAGGGAGTAGT miRNA* TACTCCCTCCATTCCAAAGTT mismatches: 3 bulges: 0 |
pre-miRNA
CGACTTGCTTTGTACTCCCTCCATTCCAAAGTTAGTATAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTAGTTATCAGGGC
dot-bracket secondary structure
......((((((((((((((((.(((((((((.((.((........))...))))))))))).)))))))))).....))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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CGACTTGCTTTGTACTCCCTCCATTCCAAAGTTAGTATAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTAGTTATCAGGGC
dot-bracket secondary structure
......((((((((((((((((.(((((((((.((.((........))...))))))))))).)))))))))).....))))))
SIMILARITIES| miRBase tae-MIR1137: 0.00000000000007 PMRD tae-miR1137: 0.00000000000007 microPC miR1439: 0.000000000001 | UniProt no hits RFAM MIR1122: 3e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
