ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2019
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGGTCGGCGCTGCACGCGGC miRNA* CGTGGCGGAGCTGATCAAGGC mismatches: 3 bulges: 2 |
pre-miRNA
CAAGATGCACACCGTGGCGGAGCTGATCAAGGCCTGCGCCACCATCATCTGGACCGGGTCGGCGCTGCACGCGGCCGTCAACTT
dot-bracket secondary structure
...((((....(((((((((.(((((((..((((................)).)).))))))).)))).))))).)))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CAAGATGCACACCGTGGCGGAGCTGATCAAGGCCTGCGCCACCATCATCTGGACCGGGTCGGCGCTGCACGCGGCCGTCAACTT
dot-bracket secondary structure
...((((....(((((((((.(((((((..((((................)).)).))))))).)))).))))).)))).....
SIMILARITIES| miRBase no hits PMRD tae-miR2019: 0.000000000000001 microPC no hits | UniProt sp|P29250|LOX2_ORYSJ: 0.000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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