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ABOUT THIS RECORD
ID:
MNEST005979
species:
Triticum aestivum
miRNA family:
MIR2027
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTATTAGGTTGGTCAAATTGA
miRNA*
AATTTTATCATCCTAATATAA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AACACGTAAGTACTACTACCTCCGTTTCAGTTTACAAGTCCTGCACGTATACCTAGGTTGTC
AATTTTATCATCCTAATATAA
ACTATATAACACAAAAA
TTATACCTTTTGAAAGTAAAAACTCCAAAGTTTATGTTGGTATATTTTTTGTAATATATGACTT
GTATTAGGTTGGTCAAATTGA
CGACCTAAGAGGTAC
GCCCACGCCCTTGTAAACTGAGAGAGAGGTAGTACCACACGACC
dot-bracket secondary structure
...((....))..(((((((((..((((((((((((((....((..((.(((((((((((((
(((((.((((.((((((((((
..((((((..(((((((
.((((((........(((((..........)))))...)))))).)))))))..))))))..))
)))))))).)))).)))))))
))))))...))))).
))....)).))))))))))))))..)))))))))..........
SIMILARITIES
miRBase
no hits
PMRD
tae-miR2027
:
5e-45
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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