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ABOUT THIS RECORD
ID:
MNEST005991
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTTACTCCCTCCGTTCCTAAA
miRNA*
TAGGAACGGAGGGAGTATATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTACGCAAATT
GTTACTCCCTCCGTTCCTAAA
TATTTGTCTTTCTAGCCATTTCAAATGGAATACAACATACATCCGTATGTAGACATATTTTAGAGTGT
AGATTCNCTCATTTTGCTTTGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACAAATATT
TAGGAACGGAGGGAGTATATA
TTACTATT
dot-bracket secondary structure
.......(((.
..(((((((((((((((((((
(((((((((((((((..(((((((..((......((((((....)))))).(((((((..(((((((.
.((.....))....))))))).)))).))).))..)))))))..)))))))))))))))))
)))))))))))))))))...)
))......
SIMILARITIES
miRBase
tae-MIR1122
:
0.000000000000003
PMRD
tae-miR1122
:
0.000000000000003
microPC
miR1436
:
1e-17
UniProt
no hits
RFAM
MIR1122: 8e-19
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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