ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf89
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCTTTAGTCCCGGTTGGTGG miRNA* ACGAACCGGGACTAAAGGGGTG mismatches: 3 bulges: 1 |
pre-miRNA
ACCAAAGGCTGCCCTTTAGTCCCGGTTGGTGGCACGAACCGGGACTAAAGGGGTGGTCCTCG
dot-bracket secondary structure
......(((((((((((((((((((((.((...)).))))))))))))).))))))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ACCAAAGGCTGCCCTTTAGTCCCGGTTGGTGGCACGAACCGGGACTAAAGGGGTGGTCCTCG
dot-bracket secondary structure
......(((((((((((((((((((((.((...)).))))))))))))).))))))))....
SIMILARITIES| miRBase tae-MIR1117: 0.00000000004 PMRD tae-miR1117: 0.00000000004 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
