miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST005998
species: Triticum aestivum
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCAAAAATA

miRNA*
 TTTCCGAACGGAGGGAGTATA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TGCAGTCCAACAAAACTTAAGTACTCCCTCCGTCCAAAAATACTTGTCATCAAAATGGATAAAAAGAGATGTATCTAGAACTAAAATACATCTAGATACA
TCCNCTTTTATCTAGTTTGATGACAAGTATTTCCGAACGGAGGGAGTATATAAGTT

dot-bracket secondary structure
.............((((((.(((((((((((((....(((((((((((((((((.(((((((((.(.((((((((((((...........))))))))))
))..)))))))))).)))))))))))))))))....))))))))))))).))))))


SIMILARITIES
miRBase tae-MIR1128: 1e-41

PMRD tae-miR1128: 1e-44

microPC miR1128: 4e-54		UniProt no hits

RFAM MIR1122: 6e-47		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record




Liczniki na strone;