miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST005998
species:
Triticum aestivum
miRNA family:
MIR1122
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCCAAAAATA
miRNA*
TTTCCGAACGGAGGGAGTATA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TGCAGTCCAACAAAACTTAAG
TACTCCCTCCGTCCAAAAATA
CTTGTCATCAAAATGGATAAAAAGAGATGTATCTAGAACTAAAATACATCTAGATACA
TCCNCTTTTATCTAGTTTGATGACAAGTA
TTTCCGAACGGAGGGAGTATA
TAAGTT
dot-bracket secondary structure
.............((((((.(
((((((((((((....(((((
((((((((((((.(((((((((.(.((((((((((((...........))))))))))
))..)))))))))).))))))))))))))
)))....))))))))))))).
))))))
SIMILARITIES
miRBase
tae-MIR1128
:
1e-41
PMRD
tae-miR1128
:
1e-44
microPC
miR1128
:
4e-54
UniProt
no hits
RFAM
MIR1122: 6e-47
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record