miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST006004
species:
Triticum aestivum
miRNA family:
MIRf88
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACCAACCGGGACCAAAGAAG
miRNA*
TTTAGTCCCGGTTTGTGCC
mismatches:
2
bulges:
2
View larger
pre-miRNA
GTTGGTGGCGCAAACCGGGACCAATACACCCT
TTTAGTCCCGGTTTGTGCC
ACCAACCGGGACCAAAGGTCAGTTTTCAGCAGCCCAAAGGGCGGGAAGC
AAAGACCTTTGGTCCCGCTTCGTGG
CACCAACCGGGACCAAAGAAG
GGTACTGGTCCCGGTTTGTGCCATTGATA
dot-bracket secondary structure
(((((((((((((((((((((((.(..(((((
(((.(((((((((.(((((
((.((.((((((((((((((.((((((....((((...)))).))))))
...)))))))))))))).)).))))
))).)))))))))...)))))
)))).))))))))))))))))))))))).
SIMILARITIES
miRBase
tae-MIR1117
:
0.000009
PMRD
osa-miRf11236-akr
:
0.000000009
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record