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ABOUT THIS RECORD
ID:
MNEST006013
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTTCCTAAATA
miRNA*
NTTANGAAACGGNGGAAGTAAG
mismatches:
4
bulges:
1
View larger
pre-miRNA
ATATTAAGGTCGATATATATA
TACTCCCTCCGTTCCTAAATA
GTTGTCTTTCTAGACATTTCAAATGAGTACTACATACGGATGTATGTAGACATATTTT
AGAGTGTAGATTCACTCATTTTGCTTCGTAAGTAGTCACTTGTTGAAATGCCTANAAANACAAGTA
NTTANGAAACGGNGGAAGTAAG
ATTATAATGTNA
CTAAGG
dot-bracket secondary structure
.......(((..(((((((..
((((.((.((((((.(((.((
.((((.(((.(((.((((((((.((((((((((.((((((.(((..((((.....)))
)(((((......)))))....))))))))).))))).))))))))))))).))).))).)))).))
.))).).))))).)).))))..
..))).)))).)
))....
SIMILARITIES
miRBase
tae-MIR1122
:
8e-25
PMRD
tae-miR1122
:
8e-25
microPC
miR1436
:
2e-22
UniProt
no hits
RFAM
MIR1122: 2e-22
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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