ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf88
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTTTAGTCCCGGTTCGTGCC miRNA* CACGAACCGGAACTAATGGGGTT mismatches: 1 bulges: 2 |
pre-miRNA
CGCGGTTTGTGGCACGAACCGGAACTAATGGGGTTGAAGACCTTTAGTCCCGGTTCGTGCCACGAACCGG
dot-bracket secondary structure
..((((((((((((((((((((.(((((..(((((...)))))))))).)))))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGCGGTTTGTGGCACGAACCGGAACTAATGGGGTTGAAGACCTTTAGTCCCGGTTCGTGCCACGAACCGG
dot-bracket secondary structure
..((((((((((((((((((((.(((((..(((((...)))))))))).)))))))))))))))))))).
SIMILARITIES| miRBase tae-MIR1117: 3e-34 PMRD tae-miR1117: 3e-34 microPC miR1131: 0.0008 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: tae-miR1117 from PMRD (MNEST054692) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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