ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATACTCCCTCTGTCCCATAAT miRNA* TATGGGACGGAGGGAGTACTT mismatches: 1 bulges: 0 |
pre-miRNA
CAAATCTTAAGAAATACTCCCTCTGTCCCATAATATAAGAGCGTTTTTTACACTAGTGTAGTGTAAAAAACACTCTTATATTATGGGACGGAGGGAGTAC
TTATGAGGNACA
dot-bracket secondary structure
....(((((..((.(((((((((((((((((((((((((((.(((((((((((((...))))))))))))).))))))))))))))))))))))))))).
)).)))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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CAAATCTTAAGAAATACTCCCTCTGTCCCATAATATAAGAGCGTTTTTTACACTAGTGTAGTGTAAAAAACACTCTTATATTATGGGACGGAGGGAGTAC
TTATGAGGNACA
dot-bracket secondary structure
....(((((..((.(((((((((((((((((((((((((((.(((((((((((((...))))))))))))).))))))))))))))))))))))))))).
)).)))))....
SIMILARITIES| miRBase hvu-MIR1120: 2e-18 PMRD tae-miR1120: 6e-18 microPC miR1439: 2e-24 | UniProt no hits RFAM MIR1122: 1e-28 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
