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ABOUT THIS RECORD
ID:
MNEST006033
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCTCAAAATA
miRNA*
TTCTGGGACGGAGGGAGTATT
mismatches:
1
bulges:
0
View larger
pre-miRNA
CAGTTTCAGAAATTGTTTGCCTGATGATGTTTGCTGGCTAC
TACTCCCTCCGTCTCAAAATA
AGTGTCTCAACTTTGTACTAAATTTAGTATAAAGTTGT
ATTAAACTTGTGACACTTA
TTCTGGGACGGAGGGAGTATT
ATTTATCCTGCATGAGTGCTCCCTAAGTTGTTGAATTT
dot-bracket secondary structure
.((((.((((.((((((.....)))))).))))..))))..
((((((((((((((((.((((
((((((.(((((((((((((....))))))))))))).
...........))))))))
)).))))))))))))))))..
(((((....(((....)))....)))))..........
SIMILARITIES
miRBase
tae-MIR1137
:
0.0000001
PMRD
hpr-miR1120
:
0.0000000002
microPC
miR1439
:
5e-26
UniProt
no hits
RFAM
MIR1122: 4e-30
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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