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ABOUT THIS RECORD
ID:
MNEST006044
species:
Triticum aestivum
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGAGGGAGTATA
miRNA*
TACTCCCTCTATCCCATAATA
mismatches:
3
bulges:
0
View larger
pre-miRNA
CAACTAAAGAAA
TACTCCCTCTATCCCATAATA
TAAGAACGTTTTTGACACTAGTGTAGTGTTAAAAACGTTCTTATA
TTTTGGGACAGAGGGAGTATA
A
GTCATGCC
dot-bracket secondary structure
........((.(
((((((((((.(((((.((((
((((((((((((((((((((...))))))))))))))))))))))
)).))))).))))))))))).
.
.)).....
SIMILARITIES
miRBase
tae-MIR1120
:
4e-16
PMRD
tae-miR1120
:
4e-16
microPC
miR1439
:
2e-17
UniProt
no hits
RFAM
MIR1122: 3e-29
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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