ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCTGTAAAGAAATATAA miRNA* ATACTTCTTTACGGAGGGATT mismatches: 1 bulges: 0 |
pre-miRNA
GAAATATGTACTCCCTCTGTAAAGAAATATAAAAGCGTTTAGAACACTACTTTAGTGACCCTAAGTGCTCTTATACTTCTTTACGGAGGGATTTAATTAC
C
dot-bracket secondary structure
...........(((((((((((((((.(((((.(((((((((..(((((...)))))...))))))))).))))).))))))))))))))).........
.
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAAATATGTACTCCCTCTGTAAAGAAATATAAAAGCGTTTAGAACACTACTTTAGTGACCCTAAGTGCTCTTATACTTCTTTACGGAGGGATTTAATTAC
C
dot-bracket secondary structure
...........(((((((((((((((.(((((.(((((((((..(((((...)))))...))))))))).))))).))))))))))))))).........
.
SIMILARITIES| miRBase tae-MIR1121: 0.0000000000003 PMRD tae-miR1121: 0.0000000000003 microPC no hits | UniProt no hits RFAM MIR1122: 0.00000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
