ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTCCGTCCCAAAATAAGTGT miRNA* GCTTATTTTGGGACGGAGGCA mismatches: 0 bulges: 0 |
pre-miRNA
CTCAAGTACTCCCTCCGTCCCAAAATAAGTGTCTCAACAGTAATACAACTTTGTACTAAAGCTAGTAAAAAGTTGGAGACGCTTATTTTGGGACGGAGGC
AGTAAATAA
dot-bracket secondary structure
......((((.((((((((((((((((((((((((..........(((((((.(((((....))))).))))))))))))))))))))))))))))))).
)))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCAAGTACTCCCTCCGTCCCAAAATAAGTGTCTCAACAGTAATACAACTTTGTACTAAAGCTAGTAAAAAGTTGGAGACGCTTATTTTGGGACGGAGGC
AGTAAATAA
dot-bracket secondary structure
......((((.((((((((((((((((((((((((..........(((((((.(((((....))))).))))))))))))))))))))))))))))))).
)))).....
SIMILARITIES| miRBase far-MIR1122: 0.000001 PMRD hpr-miR1120: 0.000000005 microPC miR1439: 0.000000000000006 | UniProt no hits RFAM MIR1122: 5e-22 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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