ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACATTATGGGACAGAGGGAGT miRNA* TCCCTCCGTCCCATAATATAG mismatches: 2 bulges: 0 |
pre-miRNA
GGCTAACAAATACTCCCTCCGTCCCATAATATAGGACGTTTTTTGACACTAGTGTAGTGTCAAAAAACATCTTACATTATGGGACAGAGGGAGTAGTAAA
CAAT
dot-bracket secondary structure
..........(((((((((.((((((((((.(((((.((((((((((((((...)))))))))))))).))))).)))))))))).))))))))).....
....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGCTAACAAATACTCCCTCCGTCCCATAATATAGGACGTTTTTTGACACTAGTGTAGTGTCAAAAAACATCTTACATTATGGGACAGAGGGAGTAGTAAA
CAAT
dot-bracket secondary structure
..........(((((((((.((((((((((.(((((.((((((((((((((...)))))))))))))).))))).)))))))))).))))))))).....
....
SIMILARITIES| miRBase tae-MIR1120: 0.00000000008 PMRD tae-miR1120: 0.00000000008 microPC miR1436: 1e-22 | UniProt no hits RFAM MIR1122: 2e-27 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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